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  5. PSME_00052982-RA

PSME_00052982-RA


Description : (p20025|myb38_maize : 241.0) Myb-related protein Zm38 - Zea mays (Maize) & (at4g34990 : 240.0) Member of the R2R3 factor gene family.; myb domain protein 32 (MYB32); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 7 (TAIR:AT2G16720.1); Has 9023 Blast hits to 8385 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 473; Plants - 6077; Viruses - 3; Other Eukaryotes - 1790 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052982-RA
Cluster HCCA clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
A4A49_01393 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
Bradi1g24887 No alias MYB-like 102 0.05 Orthogroups_2024-Update
Bradi1g51747 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.07 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Brara.J02139.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G111045 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.06G188400 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G032200 No alias myb domain protein 5 0.05 Orthogroups_2024-Update
Glyma.14G039200 No alias myb domain protein 120 0.02 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
HORVU2Hr1G081720.2 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.04 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.07 Orthogroups_2024-Update
HORVU6Hr1G073500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00024333-RA No alias (at1g22640 : 197.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00027930-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00029148-RA No alias (at3g61250 : 258.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00045448-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.06 Orthogroups_2024-Update
PSME_00051333-RA No alias (at1g68320 : 167.0) putative transcription factor:... 0.02 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.06 Orthogroups_2024-Update
PSME_00052407-RA No alias (at4g09460 : 211.0) Encodes myb6 DNA-binding protein.;... 0.06 Orthogroups_2024-Update
PSME_00052652-RA No alias (p20025|myb38_maize : 250.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G199800.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G438400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g111500 No alias R2R3MYB transcription factor 7 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!