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  5. PSME_00053029-RA

PSME_00053029-RA


Description : (at5g67360 : 649.0) Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.; ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1298.0) & (original description: no original description)


Gene families : OG_42_0000006 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053029-RA
Cluster HCCA clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
107351 No alias Subtilisin-like serine endopeptidase family protein 0.02 Orthogroups_2024-Update
419590 No alias Subtilisin-like serine endopeptidase family protein 0.02 Orthogroups_2024-Update
A4A49_07172 No alias subtilisin-like protease sbt1.9 0.04 Orthogroups_2024-Update
A4A49_08609 No alias subtilisin-like protease sbt2.3 0.02 Orthogroups_2024-Update
A4A49_14169 No alias subtilisin-like protease sbt1.7 0.02 Orthogroups_2024-Update
A4A49_27015 No alias subtilisin-like protease sbt1.2 0.02 Orthogroups_2024-Update
A4A49_27055 No alias subtilisin-like protease sbt1.2 0.02 Orthogroups_2024-Update
At1g32950 No alias Subtilisin-like protease SBT3.4... 0.03 Orthogroups_2024-Update
At4g10520 No alias Subtilisin-like protease SBT3.9... 0.02 Orthogroups_2024-Update
At5g03620 No alias Subtilisin-like protease SBT4.15... 0.04 Orthogroups_2024-Update
At5g51750 No alias Subtilisin-like protease SBT1.3... 0.02 Orthogroups_2024-Update
At5g59120 No alias Subtilisin-like protease SBT4.13... 0.03 Orthogroups_2024-Update
Bradi3g10037 No alias Subtilase family protein 0.03 Orthogroups_2024-Update
Brara.A01843.1 No alias protease *(SBT4) 0.03 Orthogroups_2024-Update
Brara.A03214.1 No alias protease *(SBT1) 0.04 Orthogroups_2024-Update
Brara.B03008.1 No alias protease *(SBT5) 0.03 Orthogroups_2024-Update
Brara.C01102.1 No alias protease *(SBT4) 0.03 Orthogroups_2024-Update
Brara.F03735.1 No alias protease *(SBT2) 0.03 Orthogroups_2024-Update
Brara.I00854.1 No alias protease *(SBT1) 0.02 Orthogroups_2024-Update
Brara.J00232.1 No alias protease *(SBT1) 0.03 Orthogroups_2024-Update
Brara.K00582.1 No alias protease *(SBT2) 0.03 Orthogroups_2024-Update
GRMZM2G390358 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Glyma.06G022600 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Glyma.08G129000 No alias Subtilase family protein 0.03 Orthogroups_2024-Update
Glyma.11G184800 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Glyma.13G110800 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Glyma.17G048700 No alias Subtilase family protein 0.03 Orthogroups_2024-Update
Glyma.17G133400 No alias Subtilase family protein 0.03 Orthogroups_2024-Update
Glyma.18G249800 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G013170.1 No alias protease *(SBT1) 0.04 Orthogroups_2024-Update
HORVU5Hr1G097150.1 No alias protease *(SBT1) 0.03 Orthogroups_2024-Update
HORVU6Hr1G032770.2 No alias protease *(SBT5) 0.02 Orthogroups_2024-Update
LOC_Os01g64860 No alias OsSub11 - Putative Subtilisin homologue, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g35140 No alias OsSub41 - Putative Subtilisin homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48650 No alias OsSub54 - Putative Subtilisin homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g26920 No alias OsSub57 - Putative Subtilisin homologue, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g30458 No alias subtilisin-like protease, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g25450 No alias OsSub60 - Putative Subtilisin homologue, expressed 0.04 Orthogroups_2024-Update
MA_10430416g0010 No alias (at2g04160 : 410.0) isolated from differential screening... 0.03 Orthogroups_2024-Update
MA_106581g0010 No alias (at2g04160 : 734.0) isolated from differential screening... 0.03 Orthogroups_2024-Update
MA_287999g0010 No alias (at5g67360 : 482.0) Encodes a subtilisin-like serine... 0.03 Orthogroups_2024-Update
PSME_00022346-RA No alias (at5g67360 : 725.0) Encodes a subtilisin-like serine... 0.03 Orthogroups_2024-Update
PSME_00032683-RA No alias (at1g20160 : 699.0) ATSBT5.2; FUNCTIONS IN: identical... 0.04 Orthogroups_2024-Update
Potri.001G167300 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Potri.002G018600 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Potri.003G118800 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Potri.006G076200 No alias subtilisin-like serine protease 3 0.03 Orthogroups_2024-Update
Potri.010G196800 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Potri.010G196901 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Potri.011G050100 No alias Subtilisin-like serine endopeptidase family protein 0.03 Orthogroups_2024-Update
Potri.012G133200 No alias subtilase 4.12 0.04 Orthogroups_2024-Update
Potri.014G026600 No alias Subtilase family protein 0.02 Orthogroups_2024-Update
Potri.014G074500 No alias xylem serine peptidase 1 0.03 Orthogroups_2024-Update
Potri.018G143400 No alias PA-domain containing subtilase family protein 0.02 Orthogroups_2024-Update
Seita.1G266600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G240700.1 No alias protease *(SBT5) 0.03 Orthogroups_2024-Update
Sobic.002G352501.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g087780 No alias LOW QUALITY:serine protease SBT4A 0.02 Orthogroups_2024-Update
Solyc01g087790 No alias LOW QUALITY:subtilisin-like serine protease family protein 0.02 Orthogroups_2024-Update
Solyc01g087800 No alias LOW QUALITY:Subtilisin-like protease (AHRD V3.3 *** O82777_SOLLC) 0.03 Orthogroups_2024-Update
Solyc01g087810 No alias subtilisin-like serine protease family protein 0.03 Orthogroups_2024-Update
Solyc02g092670 No alias Subtilisin-like protease (AHRD V3.3 *** A9XG40_TOBAC) 0.03 Orthogroups_2024-Update
Solyc08g079840 No alias subtilisin-like endoprotease 0.02 Orthogroups_2024-Update
Solyc08g079870 No alias subtilisin 0.03 Orthogroups_2024-Update
Solyc08g079980 No alias Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) 0.04 Orthogroups_2024-Update
Solyc12g088760 No alias Subtilisin-like protease (AHRD V3.3 *** W9SHY0_9ROSA) 0.03 Orthogroups_2024-Update
Sopen01g034720 No alias Subtilase family 0.02 Orthogroups_2024-Update
Sopen01g053460 No alias Subtilase family 0.02 Orthogroups_2024-Update
Sopen03g002970 No alias Subtilase family 0.05 Orthogroups_2024-Update
Sopen08g028240 No alias Subtilase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003137 PA_domain 333 418
IPR000209 Peptidase_S8/S53_dom 135 543
IPR010259 S8pro/Inhibitor_I9 14 93
No external refs found!