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  5. PSME_00053164-RA

PSME_00053164-RA


Description : (at5g01750 : 174.0) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description)


Gene families : OG_42_0000351 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053164-RA
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Brara.A03389.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.16G070101 No alias Protein of unknown function (DUF567) 0.04 Orthogroups_2024-Update
Mp3g16570.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp5g19330.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Solyc09g014820 No alias LURP-one-like protein (AHRD V3.3 *** G7KW19_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 56 231
No external refs found!