1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00053190-RA

PSME_00053190-RA


Description : (at4g19970 : 309.0) CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description)


Gene families : OG_42_0000198 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053190-RA
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G109100 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
LOC_Os01g69190 No alias regulatory protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g19444 No alias regulatory protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00011548-RA No alias (at4g19970 : 530.0) CONTAINS InterPro DOMAIN/s:... 0.04 Orthogroups_2024-Update
PSME_00026717-RA No alias (at5g44820 : 275.0) Nucleotide-diphospho-sugar... 0.04 Orthogroups_2024-Update
PSME_00053365-RA No alias (at1g14590 : 288.0) Nucleotide-diphospho-sugar... 0.04 Orthogroups_2024-Update
Potri.002G139800 No alias Nucleotide-diphospho-sugar transferase family protein 0.02 Orthogroups_2024-Update
Potri.012G114800 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 143 340
No external refs found!