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  5. PSME_00053197-RA

PSME_00053197-RA


Description : (at2g41250 : 172.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0001270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053197-RA
Cluster HCCA clusters: Cluster_483

Target Alias Description ECC score Gene Family Method Actions
PSME_00008485-RA No alias (at2g41250 : 210.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
PSME_00036438-RA No alias (at2g41250 : 132.0) Haloacid dehalogenase-like hydrolase... 0.06 Orthogroups_2024-Update
Solyc10g079620 No alias haloacid dehalogenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!