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  5. PSME_00053331-RA

PSME_00053331-RA


Description : (at3g61250 : 251.0) Member of the R2R3 factor gene family.; myb domain protein 17 (MYB17); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8810 Blast hits to 8210 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 695; Fungi - 480; Plants - 5869; Viruses - 3; Other Eukaryotes - 1763 (source: NCBI BLink). & (p80073|myb2_phypa : 201.0) Myb-related protein Pp2 - Physcomitrella patens (Moss) & (reliability: 502.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053331-RA
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At3g24310 No alias MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5] 0.03 Orthogroups_2024-Update
Bradi2g01960 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Bradi3g56917 No alias myb domain protein 20 0.05 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
GRMZM2G051256 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.08G059900 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.05 Orthogroups_2024-Update
HORVU3Hr1G056980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00010958-RA No alias (at3g61250 : 283.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
PSME_00019108-RA No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00039314-RA No alias "(at3g49690 : 223.0) ""Putative homolog of the Blind... 0.05 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
PSME_00051920-RA No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00053584-RA No alias (at3g61250 : 171.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Sobic.002G196100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G136600.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.07 Orthogroups_2024-Update
Sopen09g033040 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 110
IPR001005 SANT/Myb 15 62
No external refs found!