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  5. PSME_00053363-RA

PSME_00053363-RA


Description : (at1g58340 : 234.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053363-RA
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
A4A49_12491 No alias protein detoxification 49 0.03 Orthogroups_2024-Update
Brara.A00811.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.A01316.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Glyma.20G155500 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Kfl00174_0160 kfl00174_0160_v1.... (at4g29140 : 266.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Seita.4G183800.1 No alias metabolite transporter *(DTX) 0.01 Orthogroups_2024-Update
Seita.9G481000.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sobic.004G283500.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Solyc04g076950 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BUD2_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 185 290
IPR002528 MATE_fam 85 182
No external refs found!