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  5. PSME_00053436-RA

PSME_00053436-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053436-RA
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
At1g70810 No alias Protein C2-DOMAIN ABA-RELATED 7... 0.03 Orthogroups_2024-Update
Brara.A01156.1 No alias class III ARF-GAP ARF-GTPase-activating protein 0.03 Orthogroups_2024-Update
Glyma.07G102400 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G039050.2 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
MA_130250g0010 No alias (at1g73580 : 100.0) Calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
MA_24589g0010 No alias (at1g73580 : 121.0) Calcium-dependent lipid-binding... 0.05 Orthogroups_2024-Update
Mp3g23260.1 No alias ADP-ribosylation factor GTPase-activating protein AGD12... 0.02 Orthogroups_2024-Update
PSME_00048258-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00050324-RA No alias (at1g73580 : 112.0) Calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
Sobic.002G307600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g063360 No alias Calcium-dependent lipid-binding domain-containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 8 103
No external refs found!