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  5. PSME_00053499-RA

PSME_00053499-RA


Description : (at2g29590 : 94.4) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description)


Gene families : OG_42_0000912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053499-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Bradi4g09050 No alias Thioesterase superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G397661 No alias Thioesterase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G224300 No alias Thioesterase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G204200 No alias Thioesterase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G204100 No alias Thioesterase superfamily protein 0.02 Orthogroups_2024-Update
MA_10425951g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043960-RA No alias (at2g29590 : 89.7) Thioesterase superfamily protein;... 0.04 Orthogroups_2024-Update
Seita.5G008500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G232000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G195300.3 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006683 Thioestr_dom 75 143
No external refs found!