Description : (at4g02750 : 615.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1122.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00053797-RA | |
Cluster | HCCA clusters: Cluster_250 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g12770 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | Orthogroups_2024-Update | |
HORVU0Hr1G023470.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G073540.14 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
MA_124868g0020 | No alias | (at4g13650 : 517.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
MA_127785g0010 | No alias | (at2g03880 : 512.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
MA_25729g0010 | No alias | (at2g22070 : 551.0) pentatricopeptide (PPR)... | 0.06 | Orthogroups_2024-Update | |
MA_4438g0010 | No alias | (at1g11290 : 719.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | Orthogroups_2024-Update | |
PSME_00003821-RA | No alias | (at4g13650 : 639.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00038079-RA | No alias | (at3g02010 : 593.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
Sobic.003G336400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 681 | 805 |
IPR002885 | Pentatricopeptide_repeat | 247 | 275 |
IPR002885 | Pentatricopeptide_repeat | 277 | 324 |
IPR002885 | Pentatricopeptide_repeat | 507 | 556 |
IPR002885 | Pentatricopeptide_repeat | 407 | 455 |
IPR002885 | Pentatricopeptide_repeat | 583 | 606 |
IPR002885 | Pentatricopeptide_repeat | 187 | 216 |
IPR002885 | Pentatricopeptide_repeat | 219 | 246 |
IPR002885 | Pentatricopeptide_repeat | 350 | 373 |
No external refs found! |