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  5. Sopen06g017110

Sopen06g017110


Description : Ribosomal protein L3


Gene families : OG_42_0007933 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g017110
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
430901 No alias Ribosomal protein L3 family protein 0.03 Orthogroups_2024-Update
A4A49_14193 No alias 50s ribosomal protein l3, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g03270 No alias Ribosomal protein L3 family protein 0.11 Orthogroups_2024-Update
Brara.C02181.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Cre48.g761197 No alias Ribosomal protein L3 family protein 0.13 Orthogroups_2024-Update
Glyma.04G002300 No alias Ribosomal protein L3 family protein 0.04 Orthogroups_2024-Update
Glyma.06G001800 No alias Ribosomal protein L3 family protein 0.06 Orthogroups_2024-Update
HORVU6Hr1G018830.4 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.15 Orthogroups_2024-Update
Kfl00188_0090 kfl00188_0090_v1.1 (o80360|rk3_tobac : 273.0) 50S ribosomal protein L3,... 0.04 Orthogroups_2024-Update
MA_10432831g0010 No alias (at2g43030 : 375.0) Ribosomal protein L3 family protein;... 0.03 Orthogroups_2024-Update
Potri.013G070100 No alias Ribosomal protein L3 family protein 0.11 Orthogroups_2024-Update
Pp1s117_86V6 No alias 50s ribosomal protein l3 0.02 Orthogroups_2024-Update
Pp1s144_93V6 No alias 50s ribosomal protein l3 0.05 Orthogroups_2024-Update
Seita.1G093900.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sobic.004G034500.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.12 Orthogroups_2024-Update
Solyc06g051200 No alias Ribosomal protein L3 family protein (AHRD V3.3 *** AT2G43030.1) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 158 246
No external refs found!