PSME_00053933-RA

Description : (at3g56891 : 120.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Heavy-metal-associated, conserved site (InterPro:IPR017969); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G18196.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)

Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00053933-RA
Cluster	HCCA clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
29653	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Orthogroups_2024-Update
At5g66110	No alias	Heavy metal-associated isoprenylated plant protein 27...	0.05	Orthogroups_2024-Update
Bradi2g01800	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g26615	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g42910	No alias	Heavy metal transport/detoxification superfamily protein	0.05	Orthogroups_2024-Update
Brara.E03383.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I03269.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
GRMZM2G036631	No alias	Heavy metal transport/detoxification superfamily protein	0.04	Orthogroups_2024-Update
Glyma.06G106700	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G264100	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G210500	No alias	Heavy metal transport/detoxification superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G104400	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G019300	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G072500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU3Hr1G114920.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G112560.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU6Hr1G009000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os07g47480	No alias	heavy metal-associated domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_9120066g0010	No alias	(at3g56891 : 105.0) Heavy metal transport/detoxification...	0.03	Orthogroups_2024-Update
Mp1g12200.1	No alias	no hits & (original description: none)	0.02	Orthogroups_2024-Update
Potri.004G091700	No alias	Heavy metal transport/detoxification superfamily protein	0.03	Orthogroups_2024-Update
Seita.5G085100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G168600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G139900.1	No alias	Unknown function	0.07	Orthogroups_2024-Update
Solyc01g080070	No alias	Heavy metal transport/detoxification superfamily protein...	0.02	Orthogroups_2024-Update
Solyc11g007200	No alias	Heavy metal transport/detoxification superfamily protein...	0.03	Orthogroups_2024-Update
Sopen03g007490	No alias	Heavy-metal-associated domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0030001	metal ion transport	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	4	57

External Links

No external refs found!

PSME_00053933-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation