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  5. PSME_00053952-RA

PSME_00053952-RA


Description : (at1g53680 : 144.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 28 (GSTU28); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6308 Blast hits to 6256 proteins in 1129 species: Archae - 0; Bacteria - 2948; Metazoa - 456; Fungi - 175; Plants - 1987; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (p49332|gstxc_tobac : 143.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (reliability: 288.0) & (original description: no original description)


Gene families : OG_42_0000012 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053952-RA

Target Alias Description ECC score Gene Family Method Actions
227866 No alias glutathione S-transferase TAU 19 0.03 Orthogroups_2024-Update
Brara.B01889.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Glyma.03G073702 No alias glutathione S-transferase TAU 8 0.03 Orthogroups_2024-Update
HORVU1Hr1G049090.2 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
PSME_00017932-RA No alias (at1g59700 : 193.0) Encodes glutathione transferase... 0.02 Orthogroups_2024-Update
PSME_00035347-RA No alias no hits & (original description: no original description) 0.09 Orthogroups_2024-Update
Solyc01g081270 No alias Glutathione s-transferase, putative (AHRD V3.3 *** B9SPC9_RICCO) 0.04 Orthogroups_2024-Update
Solyc09g011550 No alias Glutathione S-transferase (AHRD V3.3 *** C0LF68_CAPAN) 0.03 Orthogroups_2024-Update
Solyc09g011640 No alias Putative glutathione S-transferase T2 0.03 Orthogroups_2024-Update
Sopen06g026330 No alias Glutathione S-transferase, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004046 GST_C 125 209
IPR004045 Glutathione_S-Trfase_N 8 78
No external refs found!