PSME_00053956-RA

Description : (at2g46740 : 404.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: cell wall; EXPRESSED IN: leaf apex, root; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46750.1); Has 2786 Blast hits to 2671 proteins in 804 species: Archae - 14; Bacteria - 1897; Metazoa - 120; Fungi - 214; Plants - 254; Viruses - 0; Other Eukaryotes - 287 (source: NCBI BLink). & (reliability: 808.0) & (original description: no original description)

Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00053956-RA
Cluster	HCCA clusters: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
403566	No alias	D-arabinono-1,4-lactone oxidase family protein	0.03	Orthogroups_2024-Update
A4A49_00591	No alias	l-gulonolactone oxidase 3	0.04	Orthogroups_2024-Update
Glyma.19G259400	No alias	D-arabinono-1,4-lactone oxidase family protein	0.03	Orthogroups_2024-Update
LOC_Os08g02230	No alias	FAD-binding and arabino-lactone oxidase domains...	0.02	Orthogroups_2024-Update
MA_48869g0010	No alias	(at2g46750 : 286.0) D-arabinono-1,4-lactone oxidase...	0.03	Orthogroups_2024-Update
PSME_00017892-RA	No alias	(at2g46760 : 560.0) D-arabinono-1,4-lactone oxidase...	0.05	Orthogroups_2024-Update
PSME_00019443-RA	No alias	(at2g46750 : 628.0) D-arabinono-1,4-lactone oxidase...	0.03	Orthogroups_2024-Update
PSME_00030249-RA	No alias	(at2g46740 : 295.0) D-arabinono-1,4-lactone oxidase...	0.05	Orthogroups_2024-Update
PSME_00039895-RA	No alias	(at2g46760 : 542.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
PSME_00039896-RA	No alias	(at2g46740 : 531.0) D-arabinono-1,4-lactone oxidase...	0.04	Orthogroups_2024-Update
Potri.002G178300	No alias	D-arabinono-1,4-lactone oxidase family protein	0.03	Orthogroups_2024-Update
Potri.018G039600	No alias	D-arabinono-1,4-lactone oxidase family protein	0.03	Orthogroups_2024-Update
Sobic.008G145900.1	No alias	L-gulono-1,4-lactone oxidase *(GULLO)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
CC	GO:0031262	Ndc80 complex	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	51	181
IPR007173	ALO	396	532

External Links

No external refs found!

PSME_00053956-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation