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  5. Solyc02g071350

Solyc02g071350


Description : ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR)


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g071350
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
233433 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
A4A49_01823 No alias putative abc transporter b family member 8 0.03 Orthogroups_2024-Update
Bradi3g10680 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Brara.F03152.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
LOC_Os01g50160 No alias MDR-like ABC transporter, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00016714-RA No alias (q6yuu5|mdr_orysa : 1107.0) Putative multidrug... 0.03 Orthogroups_2024-Update
Potri.014G113100 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.03 Orthogroups_2024-Update
Potri.017G085000 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Seita.7G258700.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sopen06g004020 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen12g033620 No alias ABC transporter transmembrane region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 699 970
IPR011527 ABC1_TM_dom 35 307
IPR003439 ABC_transporter-like 377 524
IPR003439 ABC_transporter-like 1039 1188
No external refs found!