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PSME_00054343-RA


Description : (at1g71870 : 550.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10234 Blast hits to 10086 proteins in 1918 species: Archae - 185; Bacteria - 7350; Metazoa - 148; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 1100.0) & (original description: no original description)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054343-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_09437 No alias protein detoxification 49 0.02 Orthogroups_2024-Update
Glyma.01G132200 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.01G216600 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Sobic.001G446800.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Solyc01g066560 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4AWQ7_SOLLC) 0.02 Orthogroups_2024-Update
Sopen04g030600 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 42 202
IPR002528 MATE_fam 263 424
No external refs found!