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  5. PSME_00054488-RA

PSME_00054488-RA


Description : (at3g48090 : 129.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054488-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
A4A49_12178 No alias lipase-like pad4 0.03 Orthogroups_2024-Update
PSME_00013655-RA No alias (at3g48090 : 101.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00014252-RA No alias (at3g48090 : 116.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00014388-RA No alias (at3g48090 : 135.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00016196-RA No alias (at3g48090 : 125.0) Component of R gene-mediated disease... 0.06 Orthogroups_2024-Update
PSME_00028376-RA No alias (at3g48090 : 203.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
PSME_00032097-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00033222-RA No alias (at3g48090 : 124.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00037067-RA No alias (at3g48090 : 130.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00044214-RA No alias (at3g48090 : 123.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00045837-RA No alias (at3g48090 : 129.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00045875-RA No alias (at3g48090 : 129.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update
PSME_00045985-RA No alias (at3g48090 : 137.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
PSME_00050006-RA No alias (at3g48090 : 113.0) Component of R gene-mediated disease... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 114 224
No external refs found!