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  5. PSME_00054518-RA

PSME_00054518-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054518-RA
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
110600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
MA_10430358g0010 No alias (at1g61180 : 147.0) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
MA_165401g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_377539g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6091465g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00004143-RA No alias (at4g27220 : 184.0) NB-ARC domain-containing disease... 0.05 Orthogroups_2024-Update
PSME_00006361-RA No alias (at1g12280 : 208.0) LRR and NB-ARC domains-containing... 0.06 Orthogroups_2024-Update
PSME_00014480-RA No alias (at4g27220 : 130.0) NB-ARC domain-containing disease... 0.05 Orthogroups_2024-Update
PSME_00046491-RA No alias (at4g27220 : 174.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00052602-RA No alias (at4g27220 : 206.0) NB-ARC domain-containing disease... 0.06 Orthogroups_2024-Update
PSME_00054407-RA No alias (at1g12280 : 239.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00056136-RA No alias (at1g61300 : 100.0) LRR and NB-ARC domains-containing... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 71 176
No external refs found!