Sopen06g017530


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g017530
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G066090.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10427394g0020 No alias (at2g16910 : 81.6) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
MA_196213g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00012853-RA No alias (at2g16910 : 88.2) Encodes a basic helix-loop helix... 0.03 Orthogroups_2024-Update
PSME_00014660-RA No alias (at2g16910 : 101.0) Encodes a basic helix-loop helix... 0.02 Orthogroups_2024-Update
PSME_00019813-RA No alias (at5g57150 : 86.7) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 129 173
No external refs found!