Description : (at2g21170 : 181.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (q9m4s8|tpic_fraan : 177.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Fragaria ananassa (Strawberry) & (reliability: 362.0) & (original description: no original description)
Gene families : OG_42_0001246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00054631-RA | |
Cluster | HCCA clusters: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g54650 | No alias | triosephosphate isomerase | 0.03 | Orthogroups_2024-Update | |
Bradi4g36310 | No alias | triosephosphate isomerase | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G082630.5 | No alias | triosephosphate isomerase & triosephosphate isomerase &... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004807 | triose-phosphate isomerase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
BP | GO:0015996 | chlorophyll catabolic process | IEP | Predicted GO |
MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0046149 | pigment catabolic process | IEP | Predicted GO |
MF | GO:0047746 | chlorophyllase activity | IEP | Predicted GO |
BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000652 | Triosephosphate_isomerase | 8 | 120 |
No external refs found! |