Description : (at5g01880 : 101.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00054668-RA | |
Cluster | HCCA clusters: Cluster_110 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_24308 | No alias | ring-h2 finger protein atl66 | 0.02 | Orthogroups_2024-Update | |
Bradi4g44454 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G292600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G074210.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G081150.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G004090.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
MA_19072g0010 | No alias | (at5g17600 : 137.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_6934973g0010 | No alias | (at5g01880 : 125.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.03 | Orthogroups_2024-Update | |
Pp1s102_105V6 | No alias | ring finger | 0.03 | Orthogroups_2024-Update | |
Seita.2G390800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G170300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.006G184500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Sobic.009G110200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen04g036320 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen07g027380 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen09g005360 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
No external refs found! |