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  5. PSME_00054676-RA

PSME_00054676-RA


Description : (at4g31590 : 540.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C5 (CSLC5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 5645 Blast hits to 5642 proteins in 1596 species: Archae - 219; Bacteria - 4417; Metazoa - 64; Fungi - 93; Plants - 510; Viruses - 16; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 1080.0) & (original description: no original description)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054676-RA
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
230176 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.01 Orthogroups_2024-Update
At4g31590 No alias CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0] 0.02 Orthogroups_2024-Update
Bradi3g06740 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Orthogroups_2024-Update
Brara.B03324.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G190200 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.01 Orthogroups_2024-Update
Glyma.08G222800 No alias Cellulose-synthase-like C5 0.06 Orthogroups_2024-Update
LOC_Os01g56130 No alias CSLC1 - cellulose synthase-like family C, expressed 0.01 Orthogroups_2024-Update
MA_96942g0010 No alias (at5g03760 : 870.0) encodes a beta-mannan synthase that... 0.01 Orthogroups_2024-Update
PSME_00009942-RA No alias (at4g07960 : 274.0) encodes a gene similar to cellulose... 0.01 Orthogroups_2024-Update
PSME_00019217-RA No alias (at4g31590 : 185.0) encodes a gene similar to cellulose... 0.01 Orthogroups_2024-Update
Potri.004G189000 No alias cellulose synthase-like A02 0.01 Orthogroups_2024-Update
Potri.006G116900 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.01 Orthogroups_2024-Update
Sobic.002G022700.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.01 Orthogroups_2024-Update
Solyc10g083670 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!