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  5. PSME_00054773-RA

PSME_00054773-RA


Description : (at3g51680 : 212.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 199.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 424.0) & (original description: no original description)


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054773-RA
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
At3g51680 No alias Short-chain dehydrogenase reductase 2a... 0.03 Orthogroups_2024-Update
Glyma.03G041500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G222600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G021500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G021540.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00027_0500 kfl00027_0500_v1.1 (at3g26770 : 206.0) NAD(P)-binding Rossmann-fold... 0.01 Orthogroups_2024-Update
MA_112182g0010 No alias (at3g51680 : 203.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_289156g0010 No alias (at3g51680 : 225.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00005454-RA No alias (at3g51680 : 354.0) NAD(P)-binding Rossmann-fold... 0.06 Orthogroups_2024-Update
PSME_00006758-RA No alias (at3g51680 : 301.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00029611-RA No alias (at3g51680 : 203.0) NAD(P)-binding Rossmann-fold... 0.06 Orthogroups_2024-Update
PSME_00030167-RA No alias (p50160|ts2_maize : 170.0) Sex determination protein... 0.03 Orthogroups_2024-Update
PSME_00039238-RA No alias (at3g51680 : 389.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
Potri.016G073700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Seita.6G139300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc12g056610 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g056710 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen12g029250 No alias Enoyl-(Acyl carrier protein) reductase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!