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Description : (at4g02750 : 498.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: no original description)
Gene families : OG_42_0022310 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00054801-RA | |
| Cluster | HCCA clusters: Cluster_146 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 366 | 399 |
| IPR002885 | Pentatricopeptide_repeat | 592 | 639 |
| IPR002885 | Pentatricopeptide_repeat | 491 | 538 |
| IPR002885 | Pentatricopeptide_repeat | 235 | 282 |
| IPR002885 | Pentatricopeptide_repeat | 134 | 180 |
| IPR002885 | Pentatricopeptide_repeat | 310 | 332 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 666 | 690 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 430 |
| IPR002885 | Pentatricopeptide_repeat | 431 | 460 |
| No external refs found! |