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  5. PSME_00054805-RA

PSME_00054805-RA


Description : (at2g33570 : 533.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1066.0) & (original description: no original description)


Gene families : OG_42_0000862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054805-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
A4A49_41718 No alias galactan beta-1,4-galactosyltransferase gals3 0.03 Orthogroups_2024-Update
Bradi3g53170 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Brara.A01096.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.03 Orthogroups_2024-Update
Brara.E01039.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.03 Orthogroups_2024-Update
Brara.F03725.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.05 Orthogroups_2024-Update
GRMZM2G164912 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Glyma.09G047900 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
Glyma.16G094100 No alias Domain of unknown function (DUF23) 0.03 Orthogroups_2024-Update
LOC_Os02g48190 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_2788g0010 No alias (at2g33570 : 543.0) Domain of unknown function (DUF23);... 0.05 Orthogroups_2024-Update
Potri.003G156600 No alias Domain of unknown function (DUF23) 0.02 Orthogroups_2024-Update
Potri.005G258900 No alias Domain of unknown function (DUF23) 0.04 Orthogroups_2024-Update
Pp1s25_268V6 No alias F4P9.34; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s556_1V6 No alias F4P9.34; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.4G142300.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.03 Orthogroups_2024-Update
Sopen02g026800 No alias Glycosyltransferase family 92 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 248 471
No external refs found!