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  5. Sopen06g017710

Sopen06g017710


Description : gag-polypeptide of LTR copia-type


Gene families : OG_42_0000434 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g017710
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Sopen06g013240 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen07g028620 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 451 524
No external refs found!