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  5. PSME_00054912-RA

PSME_00054912-RA


Description : (at1g66150 : 561.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (o24585|cri4_maize : 211.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1122.0) & (original description: no original description)


Gene families : OG_42_0000775 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054912-RA
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
102446 No alias transmembrane kinase 1 0.02 Orthogroups_2024-Update
233622 No alias transmembrane kinase 1 0.03 Orthogroups_2024-Update
Seita.9G115800.1 No alias LRR-IX protein kinase & protein kinase *(TMK) & EC_2.7... 0.03 Orthogroups_2024-Update
Solyc02g070910 No alias Ontology_term=GO:0004675 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009653 anatomical structure morphogenesis IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032989 cellular component morphogenesis IEP Predicted GO
BP GO:0048869 cellular developmental process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 111 152
IPR013210 LRR_N_plant-typ 332 369
IPR013210 LRR_N_plant-typ 30 66
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 648 885
No external refs found!