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  5. PSME_00054915-RA

PSME_00054915-RA


Description : (at2g39220 : 406.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (p15478|pat5_soltu : 144.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 812.0) & (original description: no original description)


Gene families : OG_42_0000819 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054915-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_06736 No alias putative inactive patatin-like protein 9 0.02 Orthogroups_2024-Update
A4A49_13348 No alias patatin-like protein 6 0.02 Orthogroups_2024-Update
Bradi1g06610 No alias patatin-like protein 6 0.03 Orthogroups_2024-Update
Brara.I03760.1 No alias phospholipase-A2 *(pPLA2-III)) 0.02 Orthogroups_2024-Update
Glyma.03G154200 No alias PATATIN-like protein 9 0.02 Orthogroups_2024-Update
Glyma.09G022000 No alias patatin-like protein 6 0.02 Orthogroups_2024-Update
Glyma.10G211300 No alias PATATIN-like protein 6 0.03 Orthogroups_2024-Update
HORVU0Hr1G008670.3 No alias phospholipase-A2 *(pPLA2-III)) 0.03 Orthogroups_2024-Update
LOC_Os12g41720 No alias PLA IIIA/PLP7, putative, expressed 0.01 Orthogroups_2024-Update
MA_10436031g0020 No alias (at3g54950 : 250.0) patatin-like protein 6 (PLA IIIA);... 0.01 Orthogroups_2024-Update
PSME_00030640-RA No alias (at2g39220 : 399.0) PATATIN-like protein 6 (PLP6);... 0.01 Orthogroups_2024-Update
PSME_00036768-RA No alias (at2g39220 : 385.0) PATATIN-like protein 6 (PLP6);... 0.02 Orthogroups_2024-Update
Potri.002G052600 No alias PATATIN-like protein 9 0.02 Orthogroups_2024-Update
Solyc10g078530 No alias Patatin (AHRD V3.3 *** M1C6Q0_SOLTU) 0.02 Orthogroups_2024-Update
Sopen10g029180 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 80 283
No external refs found!