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  5. PSME_00055084-RA

PSME_00055084-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055084-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_43428 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.A03295.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G398024 No alias hAT dimerisation domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.02G172500 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
Glyma.03G080400 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.06G236900 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
Glyma.10G113200 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
Glyma.20G072800 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
MA_10437182g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_171023g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00002788-RA No alias (at4g05160 : 161.0) Encodes a peroxisomal protein... 0.02 Orthogroups_2024-Update
PSME_00003940-RA No alias (at1g79740 : 137.0) hAT transposon superfamily;... 0.05 Orthogroups_2024-Update
PSME_00016751-RA No alias (at1g79740 : 133.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00021945-RA No alias (at5g33406 : 100.0) hAT dimerisation domain-containing... 0.04 Orthogroups_2024-Update
PSME_00022489-RA No alias (at5g33406 : 99.0) hAT dimerisation domain-containing... 0.01 Orthogroups_2024-Update
PSME_00029885-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00033256-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00033581-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc02g043850 No alias No description available 0.02 Orthogroups_2024-Update
Solyc03g063270 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g030510 No alias hAT transposon superfamily (AHRD V3.3 *** AT4G15020.2) 0.03 Orthogroups_2024-Update
Solyc10g047710 No alias No description available 0.03 Orthogroups_2024-Update
Sopen09g001560 No alias hAT family C-terminal dimerisation region 0.02 Orthogroups_2024-Update
Sopen10g007400 No alias Protein of unknown function (DUF 659) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!