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  5. PSME_00055185-RA

PSME_00055185-RA


Description : "(at5g23190 : 299.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055185-RA
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
111270 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.02 Orthogroups_2024-Update
418431 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
Bradi1g75730 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.04 Orthogroups_2024-Update
LOC_Os10g34480 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429672g0010 No alias "(at3g48520 : 441.0) member of CYP94B; ""cytochrome... 0.04 Orthogroups_2024-Update
MA_10430051g0010 No alias "(at2g45510 : 481.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
Mp4g01410.1 No alias Cytochrome P450 704B1 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Mp6g06780.1 No alias Cytochrome P450 704B1 OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
PSME_00029546-RA No alias "(at3g48520 : 288.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
PSME_00051142-RA No alias "(at4g00360 : 452.0) Encodes a member of the CYP86A... 0.03 Orthogroups_2024-Update
Pp1s332_42V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Seita.1G265100.1 No alias fatty acyl omega-hydroxylase 0.04 Orthogroups_2024-Update
Solyc03g111280 No alias Cytochrome P450, putative (AHRD V3.3 *** B9RAH1_RICCO) 0.04 Orthogroups_2024-Update
Solyc06g074420 No alias Cytochrome P450 family protein (AHRD V3.3 *** B9HQW0_POPTR) 0.04 Orthogroups_2024-Update
Sopen01g038530 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen09g027910 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen10g031330 No alias Cytochrome P450 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 30 338
No external refs found!