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  5. PSME_00055226-RA

PSME_00055226-RA


Description : (at5g39110 : 131.0) RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39150.1); Has 1516 Blast hits to 1508 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 39; Plants - 1454; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (q9s8p4|rhre_pea : 127.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (reliability: 262.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055226-RA
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
A4A49_30960 No alias nectarin-1 0.03 Orthogroups_2024-Update
At3g04150 No alias RmlC-like cupins superfamily protein... 0.03 Orthogroups_2024-Update
Brara.A03684.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G161097 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Orthogroups_2024-Update
Glyma.19G058900 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G059100 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G059200 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g05840 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00026859-RA No alias (at1g09560 : 257.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
Sobic.007G065900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G059100.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 52 141
No external refs found!