Sopen06g017960

Description : Ion transport protein

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g017960
Cluster	HCCA clusters: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
At1g01340	No alias	Probable cyclic nucleotide-gated ion channel 10...	0.03	Orthogroups_2024-Update
At5g14870	No alias	Cyclic nucleotide-gated ion channel 18...	0.03	Orthogroups_2024-Update
Bradi4g37740	No alias	cyclic nucleotide-gated channel 14	0.02	Orthogroups_2024-Update
Brara.J00821.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
GRMZM2G005791	No alias	cyclic nucleotide-gated channel 17	0.03	Orthogroups_2024-Update
GRMZM2G074317	No alias	Cyclic nucleotide-regulated ion channel family protein	0.02	Orthogroups_2024-Update
Glyma.09G168500	No alias	cyclic nucleotide-binding transporter 1	0.02	Orthogroups_2024-Update
LOC_Os02g15580	No alias	cyclic nucleotide-gated ion channel 1, putative, expressed	0.02	Orthogroups_2024-Update
Potri.002G170000	No alias	cyclic nucleotide gated channel 10	0.03	Orthogroups_2024-Update
Potri.014G097900	No alias	cyclic nucleotide gated channel 1	0.02	Orthogroups_2024-Update
Potri.018G009200	No alias	cyclic nucleotide-gated channel 14	0.03	Orthogroups_2024-Update
Seita.3G390700.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	499	589
IPR005821	Ion_trans_dom	89	404

External Links

No external refs found!