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  5. PSME_00055339-RA

PSME_00055339-RA


Description : (at1g78370 : 232.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink). & (q03666|gstx4_tobac : 231.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (reliability: 464.0) & (original description: no original description)


Gene families : OG_42_0000012 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055339-RA
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
227866 No alias glutathione S-transferase TAU 19 0.02 Orthogroups_2024-Update
78368 No alias glutathione S-transferase TAU 19 0.02 Orthogroups_2024-Update
Bradi3g31720 No alias glutathione S-transferase TAU 18 0.02 Orthogroups_2024-Update
GRMZM2G028821 No alias Glutathione S-transferase family protein 0.02 Orthogroups_2024-Update
GRMZM2G044383 No alias Glutathione S-transferase family protein 0.03 Orthogroups_2024-Update
LOC_Os07g07320 No alias glutathione S-transferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g25590 No alias glutathione S-transferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g38489 No alias glutathione S-transferase GSTU6, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426104g0010 No alias (p25317|gstxa_tobac : 137.0) Probable glutathione... 0.03 Orthogroups_2024-Update
MA_10434037g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_14940g0020 No alias (at1g10370 : 162.0) EARLY-RESPONSIVE TO DEHYDRATION 9... 0.03 Orthogroups_2024-Update
MA_188810g0010 No alias (at1g59700 : 186.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00035106-RA No alias (at1g10370 : 206.0) EARLY-RESPONSIVE TO DEHYDRATION 9... 0.04 Orthogroups_2024-Update
PSME_00039857-RA No alias (q03666|gstx4_tobac : 222.0) Probable glutathione... 0.04 Orthogroups_2024-Update
PSME_00054683-RA No alias (at1g78320 : 223.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
Seita.8G008300.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Sobic.001G317000.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Sobic.001G318000.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Solyc09g091130 No alias Glutathione s-transferase, putative (AHRD V3.3 *** B9RWR5_RICCO) 0.02 Orthogroups_2024-Update
evm.model.tig00020693.10 No alias (q03662|gstx1_tobac : 85.1) Probable glutathione... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 15 86
No external refs found!