PSME_00055387-RA

Description : (at3g47110 : 558.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 445.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1030.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00055387-RA
Cluster	HCCA clusters: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
128654	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
A4A49_32116	No alias	lrr receptor-like serinethreonine-protein kinase fls2	0.03	Orthogroups_2024-Update
A4A49_61424	No alias	putative lrr receptor-like serinethreonine-protein kinase	0.02	Orthogroups_2024-Update
Bradi1g47130	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Brara.E02261.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
MA_10237903g0010	No alias	(at3g47570 : 172.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_125058g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_159836g0010	No alias	(at2g24130 : 563.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_256555g0010	No alias	(at5g41180 : 90.1) leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
MA_7910488g0010	No alias	(at3g47110 : 125.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_8708888g0010	No alias	(at1g25320 : 155.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_909234g0010	No alias	(at3g47570 : 99.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00014185-RA	No alias	(at3g24240 : 256.0) Leucine-rich repeat receptor-like...	0.04	Orthogroups_2024-Update
PSME_00016355-RA	No alias	(at3g47570 : 606.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00031122-RA	No alias	(at5g46330 : 295.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00035635-RA	No alias	(at3g47110 : 648.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00039997-RA	No alias	(at2g24130 : 449.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00040826-RA	No alias	(at5g63930 : 192.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00042483-RA	No alias	(at3g47570 : 568.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00044948-RA	No alias	(at3g47110 : 644.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00054181-RA	No alias	(at2g24130 : 94.4) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00055909-RA	No alias	(at3g47110 : 624.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
Sobic.005G187700.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Solyc02g072480	No alias	LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR)	0.03	Orthogroups_2024-Update
Solyc06g006020	No alias	Non-specific serine/threonine protein kinase (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen06g002000	No alias	Leucine rich repeat	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	Predicted GO
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
CC	GO:0033588	Elongator holoenzyme complex	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	638	694
IPR001611	Leu-rich_rpt	365	423
IPR001611	Leu-rich_rpt	514	534
IPR001611	Leu-rich_rpt	586	608
IPR013210	LRR_N_plant-typ	30	70
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	828	1109

External Links

No external refs found!

PSME_00055387-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation