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PSME_00055494-RA


Description : (at1g07900 : 139.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055494-RA
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Mp5g11460.1 No alias transcription factor (AS2/LOB) 0.03 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
Pp1s7_261V6 No alias LOB domain protein 6 (ASYMMETRIC LEAVES2) [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.008G005000.1 No alias AS2/LOB-type transcription factor 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 16 111
No external refs found!