PSME_00055533-RA

Description : (at3g47110 : 628.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 436.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1256.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00055533-RA
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
At3g47110	No alias	Putative receptor-like protein kinase At3g47110...	0.03	Orthogroups_2024-Update
Bradi1g72572	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Bradi4g24451	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
Brara.H00180.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
GRMZM2G073884	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
GRMZM2G389948	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.01G152300	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.05G170600	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.08G128900	No alias	EF-TU receptor	0.03	Orthogroups_2024-Update
Glyma.17G087700	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
HORVU6Hr1G038550.2	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
MA_10178643g0010	No alias	(at3g47090 : 371.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_10429751g0010	No alias	(at4g20140 : 412.0) Encodes GASSHO1 (GSO1), a putative...	0.03	Orthogroups_2024-Update
MA_10431203g0010	No alias	(at2g24130 : 284.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_10432906g0020	No alias	(at5g46330 : 129.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
MA_10434950g0020	No alias	(at3g47110 : 639.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_10435081g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_13546g0010	No alias	(at5g20480 : 145.0) Encodes a predicted leucine-rich...	0.04	Orthogroups_2024-Update
MA_168077g0010	No alias	(at3g47110 : 623.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_173608g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_45658g0010	No alias	(at5g20480 : 205.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
MA_85045g0010	No alias	(at3g47570 : 103.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_85663g0010	No alias	(at5g46330 : 340.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
MA_87248g0010	No alias	(at2g24130 : 330.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00002258-RA	No alias	(at3g47570 : 249.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00002911-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00006646-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00014024-RA	No alias	(at2g24130 : 458.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00014185-RA	No alias	(at3g24240 : 256.0) Leucine-rich repeat receptor-like...	0.04	Orthogroups_2024-Update
PSME_00016859-RA	No alias	(at5g46330 : 555.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00026494-RA	No alias	(at1g34110 : 298.0) Leucine-rich receptor-like protein...	0.02	Orthogroups_2024-Update
PSME_00027255-RA	No alias	(at2g24130 : 488.0) Leucine-rich receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00027939-RA	No alias	(at5g20480 : 394.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
PSME_00029302-RA	No alias	(at5g46330 : 580.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00035635-RA	No alias	(at3g47110 : 648.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00038472-RA	No alias	(at5g46330 : 359.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00040826-RA	No alias	(at5g63930 : 192.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00049305-RA	No alias	(at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00049434-RA	No alias	(at3g47090 : 130.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00054337-RA	No alias	(at3g47570 : 582.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00055160-RA	No alias	(at5g46330 : 382.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00055909-RA	No alias	(at3g47110 : 624.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
Potri.008G033900	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Potri.019G100866	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Seita.4G177200.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Seita.5G107000.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Seita.5G281400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.6G079200.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.003G069601.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
Sobic.008G175032.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	595	654
IPR001611	Leu-rich_rpt	522	541
IPR013210	LRR_N_plant-typ	61	101
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	762	1039

External Links

No external refs found!

PSME_00055533-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation