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Description : (at2g03880 : 347.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3; Bacteria - 26; Metazoa - 84; Fungi - 128; Plants - 40967; Viruses - 0; Other Eukaryotes - 716 (source: NCBI BLink). & (q76c99|rf1_orysa : 108.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 626.0) & (original description: no original description)
Gene families : OG_42_0022428 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00055540-RA | |
| Cluster | HCCA clusters: Cluster_47 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 465 | 515 |
| IPR002885 | Pentatricopeptide_repeat | 116 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 459 |
| IPR002885 | Pentatricopeptide_repeat | 61 | 82 |
| IPR002885 | Pentatricopeptide_repeat | 366 | 390 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 200 |
| IPR002885 | Pentatricopeptide_repeat | 291 | 340 |
| No external refs found! |