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  5. PSME_00055605-RA

PSME_00055605-RA


Description : (at3g22550 : 87.8) Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G63210.1); Has 558 Blast hits to 549 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)


Gene families : OG_42_0000100 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055605-RA
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AC233979.1_FG006 No alias Protein of unknown function (DUF581) 0.03 Orthogroups_2024-Update
At5g65040 No alias Gb [Source:UniProtKB/TrEMBL;Acc:Q9LV75] 0.03 Orthogroups_2024-Update
Bradi3g47530 No alias Protein of unknown function (DUF581) 0.02 Orthogroups_2024-Update
Brara.I01970.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
Brara.I04153.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.03 Orthogroups_2024-Update
Glyma.17G047500 No alias Protein of unknown function (DUF581) 0.02 Orthogroups_2024-Update
HORVU2Hr1G105090.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
LOC_Os02g37970 No alias DUF581 domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00027150-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00038383-RA No alias (at5g11460 : 93.6) Protein of unknown function (DUF581);... 0.04 Orthogroups_2024-Update
PSME_00041518-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043696-RA No alias (at4g17670 : 80.1) Protein of unknown function (DUF581);... 0.03 Orthogroups_2024-Update
PSME_00052700-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00053397-RA No alias (at5g11460 : 90.1) Protein of unknown function (DUF581);... 0.01 Orthogroups_2024-Update
PSME_00054789-RA No alias (at1g22160 : 84.0) Protein of unknown function (DUF581);... 0.02 Orthogroups_2024-Update
Sobic.001G481100.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
Sopen06g021160 No alias Protein of unknown function (DUF581) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007650 Zf-FLZ_dom 159 206
No external refs found!