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  5. PSME_00055607-RA

PSME_00055607-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055607-RA
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
A4A49_62388 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g43260 No alias HAT transposon superfamily protein... 0.02 Orthogroups_2024-Update
Glyma.04G117600 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
PSME_00003940-RA No alias (at1g79740 : 137.0) hAT transposon superfamily;... 0.05 Orthogroups_2024-Update
PSME_00016751-RA No alias (at1g79740 : 133.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00025529-RA No alias (at1g79740 : 126.0) hAT transposon superfamily;... 0.05 Orthogroups_2024-Update
PSME_00027624-RA No alias (at1g79740 : 142.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00038048-RA No alias (at1g79740 : 164.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00040947-RA No alias (at5g33406 : 81.3) hAT dimerisation domain-containing... 0.03 Orthogroups_2024-Update
PSME_00041191-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00041319-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00054772-RA No alias (at1g79740 : 144.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00056554-RA No alias (at5g33406 : 105.0) hAT dimerisation domain-containing... 0.03 Orthogroups_2024-Update
Solyc10g047710 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 96 173
No external refs found!