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  5. PSME_00055622-RA

PSME_00055622-RA


Description : (at1g09560 : 259.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (q9s8p4|rhre_pea : 231.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (reliability: 518.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055622-RA
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
At3g04150 No alias RmlC-like cupins superfamily protein... 0.02 Orthogroups_2024-Update
Bradi4g06080 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
Glyma.19G102700 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G036720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g18170 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g48750 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g09060 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g35760 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00042213-RA No alias (at1g09560 : 119.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
Potri.002G184900 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Pp1s337_9V6 No alias germin-like protein 0.01 Orthogroups_2024-Update
Pp1s82_6V6 No alias F14J9.22; germin-like protein (GLP4) (GLP5) [Arabidopsis... 0.02 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G147900.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 69 215
No external refs found!