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  5. PSME_00055631-RA

PSME_00055631-RA


Description : (at4g14630 : 229.0) germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.; germin-like protein 9 (GLP9); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: extracellular region, plasma membrane, plant-type vacuole; EXPRESSED IN: stem, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39110.1); Has 1524 Blast hits to 1518 proteins in 95 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 42; Plants - 1455; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q9s8p4|rhre_pea : 219.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055631-RA

Target Alias Description ECC score Gene Family Method Actions
114245 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
227274 No alias Function unknown 0.04 Orthogroups_2024-Update
229376 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
446428 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
At5g39190 No alias Germin-like protein subfamily 1 member 20... 0.05 Orthogroups_2024-Update
Glyma.16G061400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G058900 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G059100 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G059200 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G066380.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_926447g0010 No alias (at5g20630 : 238.0) Encodes a germin-like protein. Its... 0.03 Orthogroups_2024-Update
PSME_00008477-RA No alias (at1g09560 : 213.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
PSME_00026859-RA No alias (at1g09560 : 257.0) germin-like protein (GLP5);... 0.05 Orthogroups_2024-Update
Sobic.003G136200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G148000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G066808.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G067108.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G067608.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen09g032950 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 66 212
No external refs found!