Description : (at1g14290 : 352.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 2 (SBH2); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 1 (TAIR:AT1G69640.1); Has 2314 Blast hits to 2272 proteins in 379 species: Archae - 0; Bacteria - 367; Metazoa - 413; Fungi - 680; Plants - 393; Viruses - 3; Other Eukaryotes - 458 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description)
Gene families : OG_42_0001180 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001180_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00055737-RA | |
Cluster | HCCA clusters: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_26033 | No alias | sphinganine c4-monooxygenase 1 | 0.02 | Orthogroups_2024-Update | |
Bradi3g59350 | No alias | sphingoid base hydroxylase 2 | 0.02 | Orthogroups_2024-Update | |
MA_17536g0010 | No alias | (at1g14290 : 382.0) Encodes one of the two redundant... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005506 | iron ion binding | IEA | InterProScan predictions |
BP | GO:0008610 | lipid biosynthetic process | IEA | InterProScan predictions |
MF | GO:0016491 | oxidoreductase activity | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
MF | GO:0008289 | lipid binding | IEP | Predicted GO |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006694 | Fatty_acid_hydroxylase | 101 | 237 |
No external refs found! |