PSME_00055766-RA

Description : (q8lnz5|xthb_phaan : 137.0) Probable xyloglucan endotransglucosylase/hydrolase protein B precursor (EC 2.4.1.207) (VaXTH2) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (at5g13870 : 132.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00055766-RA
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
233454	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
Bradi1g27867	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.07	Orthogroups_2024-Update
Bradi1g33810	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
Bradi1g33840	No alias	xyloglucan endotransglucosylase/hydrolase 25	0.02	Orthogroups_2024-Update
Bradi4g16990	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
Brara.H02756.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Glyma.09G062600	No alias	xyloglucan endotransglycosylase 6	0.04	Orthogroups_2024-Update
Glyma.17G065300	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
Glyma.18G106500	No alias	xyloglucan endotransglucosylase/hydrolase 15	0.02	Orthogroups_2024-Update
HORVU0Hr1G022110.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
HORVU7Hr1G098440.2	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
LOC_Os03g01800	No alias	glycosyl hydrolases family 16, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g51460	No alias	glycosyl hydrolases family 16, putative, expressed	0.02	Orthogroups_2024-Update
MA_10251013g0010	No alias	(q39857\|xth_soybn : 462.0) Probable xyloglucan...	0.04	Orthogroups_2024-Update
MA_10430695g0010	No alias	(p35694\|bru1_soybn : 327.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
MA_10433908g0010	No alias	(at4g03210 : 268.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
MA_328340g0010	No alias	(at4g03210 : 285.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
MA_409361g0010	No alias	(at4g03210 : 323.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
MA_848882g0010	No alias	(at5g65730 : 338.0) xyloglucan...	0.03	Orthogroups_2024-Update
Mp2g18360.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Orthogroups_2024-Update
Mp2g21490.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
Mp4g01200.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Orthogroups_2024-Update
PSME_00001209-RA	No alias	(at4g03210 : 309.0) encodes a member of xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00009508-RA	No alias	(at5g13870 : 295.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
PSME_00017708-RA	No alias	(at4g03210 : 291.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00022999-RA	No alias	(at5g57530 : 289.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00028627-RA	No alias	(q41638\|xtha_phaan : 479.0) Xyloglucan...	0.07	Orthogroups_2024-Update
PSME_00030736-RA	No alias	(at4g37800 : 278.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00033178-RA	No alias	(at4g25810 : 349.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00035710-RA	No alias	(at2g36870 : 291.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00045375-RA	No alias	(p93349\|xth_tobac : 273.0) Probable xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00046936-RA	No alias	(p35694\|bru1_soybn : 174.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
PSME_00047371-RA	No alias	(p35694\|bru1_soybn : 289.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
PSME_00048668-RA	No alias	(p35694\|bru1_soybn : 266.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
Pp1s11_339V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.04	Orthogroups_2024-Update
Pp1s122_57V6	No alias	brassinosteroid-regulated protein bru1	0.06	Orthogroups_2024-Update
Pp1s168_29V6	No alias	xyloglucan endotransglycosylase	0.02	Orthogroups_2024-Update
Pp1s309_36V6	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Pp1s410_28V6	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Pp1s4_32V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Seita.2G313800.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.03	Orthogroups_2024-Update
Seita.4G246100.1	No alias	EC_2.4 glycosyltransferase	0.04	Orthogroups_2024-Update
Seita.9G337200.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.03	Orthogroups_2024-Update
Sobic.001G309000.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.03	Orthogroups_2024-Update
Solyc01g099630	No alias	xyloglucan endotransglucosylase-hydrolase 1	0.03	Orthogroups_2024-Update
Solyc11g065600	No alias	xyloglucan endotransglucosylase-hydrolase 4	0.03	Orthogroups_2024-Update
Sopen12g008060	No alias	Glycosyl hydrolases family 16	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
BP	GO:0006177	GMP biosynthetic process	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046037	GMP metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	92	137

External Links

No external refs found!

PSME_00055766-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation