PSME_00055780-RA

Description : (at3g24240 : 1102.0) Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink). & (p93194|rpk1_iponi : 575.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2204.0) & (original description: no original description)

Gene families : OG_42_0000035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00055780-RA
Cluster	HCCA clusters: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
165220	No alias	HAESA-like 1	0.03	Orthogroups_2024-Update
A4A49_00761	No alias	receptor-like protein kinase 5	0.02	Orthogroups_2024-Update
A4A49_36304	No alias	mdis1-interacting receptor like kinase 1	0.03	Orthogroups_2024-Update
Bradi2g08350	No alias	HAESA-like 1	0.03	Orthogroups_2024-Update
Bradi4g21836	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Bradi4g28107	No alias	HAESA-like 1	0.04	Orthogroups_2024-Update
Brara.A01093.1	No alias	LRR-XI protein kinase & CIF/TWS1-peptide receptor *(GSO)...	0.03	Orthogroups_2024-Update
Brara.G02366.1	No alias	LRR-XI protein kinase & systemic nitrogen signalling...	0.04	Orthogroups_2024-Update
Brara.I02941.1	No alias	LRR-XI protein kinase & IDA/IDL-peptide receptor kinase...	0.05	Orthogroups_2024-Update
Brara.J00578.1	No alias	LRR-XI protein kinase & systemic nitrogen signalling...	0.04	Orthogroups_2024-Update
GRMZM2G110685	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
GRMZM2G148702	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
GRMZM2G449817	No alias	Protein kinase family protein with leucine-rich repeat domain	0.02	Orthogroups_2024-Update
Glyma.01G062900	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Glyma.08G357400	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.04	Orthogroups_2024-Update
Glyma.10G227000	No alias	Concanavalin A-like lectin protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.12G118600	No alias	HAESA-like 1	0.03	Orthogroups_2024-Update
Glyma.13G253300	No alias	Leucine-rich receptor-like protein kinase family protein	0.04	Orthogroups_2024-Update
LOC_Os07g31500	No alias	leucine-rich repeat receptor protein kinase EXS...	0.03	Orthogroups_2024-Update
LOC_Os12g14480	No alias	cysteine-rich receptor-like protein kinase 23 precursor,...	0.03	Orthogroups_2024-Update
MA_181770g0010	No alias	(at5g49660 : 775.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
MA_216719g0010	No alias	(at1g28440 : 686.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
MA_61409g0010	No alias	(at1g28440 : 855.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Mp1g23000.1	No alias	Leucine-rich repeat receptor-like...	0.02	Orthogroups_2024-Update
PSME_00052604-RA	No alias	(at1g28440 : 1030.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.05	Orthogroups_2024-Update
Potri.002G070900	No alias	Leucine-rich repeat transmembrane protein kinase family protein	0.02	Orthogroups_2024-Update
Seita.3G393400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.001G265700.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.008G060500.2	No alias	SCREW peptide receptor *(NUT) & EC_2.7 transferase...	0.02	Orthogroups_2024-Update
Sobic.010G177300.1	No alias	LRR-XI protein kinase & RGF-peptide receptor *(RGFR) &...	0.04	Orthogroups_2024-Update
Solyc03g082450	No alias	Receptor-like protein kinase (AHRD V3.3 *** M8BN66_AEGTA)	0.02	Orthogroups_2024-Update
Solyc05g023990	No alias	LOW QUALITY:Leucine-rich receptor-like protein kinase...	0.03	Orthogroups_2024-Update
Sopen02g022530	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update
Sopen03g024120	No alias	Protein kinase domain	0.04	Orthogroups_2024-Update
Sopen07g027550	No alias	Protein kinase domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006448	regulation of translational elongation	IEP	Predicted GO
BP	GO:0006449	regulation of translational termination	IEP	Predicted GO
BP	GO:0006452	translational frameshifting	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0045727	positive regulation of translation	IEP	Predicted GO
BP	GO:0045901	positive regulation of translational elongation	IEP	Predicted GO
BP	GO:0045905	positive regulation of translational termination	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	384	443
IPR001611	Leu-rich_rpt	312	371
IPR001611	Leu-rich_rpt	459	515
IPR000719	Prot_kinase_dom	769	1041
IPR013210	LRR_N_plant-typ	24	65

External Links

No external refs found!

PSME_00055780-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation