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Description : (at1g75710 : 340.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description)
Gene families : OG_42_0000675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000675_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00055892-RA | |
| Cluster | HCCA clusters: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_31614 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| At5g54630 | No alias | AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1] | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G265800 | No alias | zinc finger protein-related | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G066100 | No alias | zinc finger (C2H2 type) family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G125620.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| MA_5608g0010 | No alias | (at5g54630 : 325.0) zinc finger protein-related;... | 0.05 | Orthogroups_2024-Update | |
| Potri.001G415600 | No alias | zinc finger protein-related | 0.03 | Orthogroups_2024-Update | |
| Potri.005G238300 | No alias | C2H2-like zinc finger protein | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
| MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
| BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
| MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |