1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00055894-RA

PSME_00055894-RA


Description : (at1g76700 : 248.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G21080.1); Has 22668 Blast hits to 22554 proteins in 3188 species: Archae - 168; Bacteria - 9129; Metazoa - 3918; Fungi - 2179; Plants - 2304; Viruses - 20; Other Eukaryotes - 4950 (source: NCBI BLink). & (reliability: 496.0) & (original description: no original description)


Gene families : OG_42_0000715 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000715_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055894-RA
Cluster HCCA clusters: Cluster_719

Target Alias Description ECC score Gene Family Method Actions
PSME_00008541-RA No alias (at1g21080 : 177.0) DNAJ heat shock N-terminal... 0.03 Orthogroups_2024-Update
PSME_00009277-RA No alias (at1g76700 : 273.0) DNAJ heat shock N-terminal... 0.05 Orthogroups_2024-Update
PSME_00031725-RA No alias (at1g21080 : 192.0) DNAJ heat shock N-terminal... 0.06 Orthogroups_2024-Update
Potri.002G074600 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Orthogroups_2024-Update
Pp1s156_108V6 No alias chaperone protein dnaj 10 0.02 Orthogroups_2024-Update
Sobic.002G251900.1 No alias co-chaperone *(Hsp40) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR026894 DnaJ_X 141 317
IPR001623 DnaJ_domain 11 69
No external refs found!