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- Sequence
- PSME_00055939-RA
PSME_00055939-RA
Description : (at5g44700 : 669.0) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p93194|rpk1_iponi : 550.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1338.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00055939-RA | |
| Cluster | HCCA clusters: Cluster_250 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| Bradi4g06215 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G243600 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G065000 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G065600 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G000020.5 | No alias | LRR-XII protein kinase & EC_2.7 transferase transferring... | 0.05 | Orthogroups_2024-Update | |
| HORVU7Hr1G008050.1 | No alias | LRR-XII protein kinase & EC_2.7 transferase transferring... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g34800 | No alias | leucine-rich repeat receptor protein kinase EXS... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os10g32990 | No alias | receptor-like protein kinase 2 precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00039800-RA | No alias | (at4g08850 : 390.0) Leucine-rich repeat receptor-like... | 0.08 | Orthogroups_2024-Update | |
| Potri.002G008100 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.015G123100 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.T102900 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
| Potri.T103000 | No alias | Leucine-rich repeat receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
| Seita.5G336900.1 | No alias | LRR-XII protein kinase & EC_2.7 transferase transferring... | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G413201.1 | No alias | EC_2.7 transferase transferring phosphorus-containing group | 0.03 | Orthogroups_2024-Update | |
| Sopen04g031750 | No alias | Protein kinase domain | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0000166 | nucleotide binding | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004672 | protein kinase activity | IEA | InterProScan predictions |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
| BP | GO:0006464 | cellular protein modification process | None | Extended |
| BP | GO:0006468 | protein phosphorylation | IEA | InterProScan predictions |
| BP | GO:0006793 | phosphorus metabolic process | None | Extended |
| BP | GO:0006796 | phosphate-containing compound metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| MF | GO:0008144 | drug binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| MF | GO:0016301 | kinase activity | None | Extended |
| BP | GO:0016310 | phosphorylation | None | Extended |
| MF | GO:0016740 | transferase activity | None | Extended |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | None | Extended |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | None | Extended |
| MF | GO:0017076 | purine nucleotide binding | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| MF | GO:0030554 | adenyl nucleotide binding | None | Extended |
| MF | GO:0032553 | ribonucleotide binding | None | Extended |
| MF | GO:0032555 | purine ribonucleotide binding | None | Extended |
| MF | GO:0032559 | adenyl ribonucleotide binding | None | Extended |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | None | Extended |
| MF | GO:0036094 | small molecule binding | None | Extended |
| BP | GO:0036211 | protein modification process | None | Extended |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| BP | GO:0043412 | macromolecule modification | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0044267 | cellular protein metabolic process | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:0097367 | carbohydrate derivative binding | None | Extended |
| MF | GO:0140096 | catalytic activity, acting on a protein | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| BP | GO:0008037 | cell recognition | IEP | Predicted GO |
| BP | GO:0022414 | reproductive process | IEP | Predicted GO |
| BP | GO:0048544 | recognition of pollen | IEP | Predicted GO |
