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  5. PSME_00055967-RA

PSME_00055967-RA


Description : (p19242|hsp21_pea : 100.0) 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) & (at5g12020 : 95.1) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055967-RA
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre07.g318850 No alias HSP20-like chaperones superfamily protein 0.01 Orthogroups_2024-Update
Kfl00404_0080 kfl00404_0080_v1.1 (at1g53540 : 122.0) HSP20-like chaperones superfamily... 0.02 Orthogroups_2024-Update
MA_10426614g0020 No alias (at5g59720 : 176.0) encodes a low molecular weight heat... 0.02 Orthogroups_2024-Update
PSME_00010356-RA No alias (at3g51895 : 191.0) Encodes a sulfate transporter.;... 0.03 Orthogroups_2024-Update
PSME_00051332-RA No alias (p24631|hsp21_maize : 114.0) 17.5 kDa class II heat... 0.01 Orthogroups_2024-Update
PSME_00056058-RA No alias (at5g59720 : 151.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
Pp1s105_133V6 No alias 17.8 kDa class I heat shock protein (Clone DCHSP17.7)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 42 158
No external refs found!