Description : (at2g38970 : 512.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins in 764 species: Archae - 94; Bacteria - 1613; Metazoa - 1251; Fungi - 170; Plants - 535; Viruses - 5; Other Eukaryotes - 750 (source: NCBI BLink). & (reliability: 1024.0) & (original description: no original description)
Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00055985-RA | |
Cluster | HCCA clusters: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.F02436.1 | No alias | E3 ubiquitin ligase *(WAV3) | 0.03 | Orthogroups_2024-Update | |
Glyma.02G218200 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.11G197001 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.02 | Orthogroups_2024-Update | |
PSME_00037848-RA | No alias | (at3g54780 : 99.8) Zinc finger (C3HC4-type RING finger)... | 0.04 | Orthogroups_2024-Update | |
Potri.001G082150 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
Seita.9G230200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
No external refs found! |