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  5. PSME_00055994-RA

PSME_00055994-RA


Description : (at1g65910 : 249.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7gcl7|nac74_orysa : 203.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: no original description)


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055994-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_25578 No alias nac domain-containing protein 7 0.03 Orthogroups_2024-Update
A4A49_29314 No alias nac domain-containing protein 43 0.01 Orthogroups_2024-Update
At1g33060 No alias NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2] 0.02 Orthogroups_2024-Update
At1g54330 No alias NAC domain containing protein 20... 0.02 Orthogroups_2024-Update
At1g62700 No alias NAC domain-containing protein 26... 0.03 Orthogroups_2024-Update
At1g65910 No alias NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7] 0.02 Orthogroups_2024-Update
At3g10500 No alias NAC domain-containing protein 53... 0.03 Orthogroups_2024-Update
At3g18400 No alias NAC domain containing protein 58... 0.02 Orthogroups_2024-Update
At3g61910 No alias NAC domain-containing protein 66... 0.01 Orthogroups_2024-Update
At5g07680 No alias NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34] 0.03 Orthogroups_2024-Update
At5g61430 No alias NAC domain-containing protein 100... 0.02 Orthogroups_2024-Update
Brara.A03837.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.B02909.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E02420.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02120.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03105.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J02389.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G167900 No alias vascular related NAC-domain protein 1 0.05 Orthogroups_2024-Update
Glyma.04G119500 No alias NAC 007 0.02 Orthogroups_2024-Update
Glyma.05G055900 No alias NAC 007 0.04 Orthogroups_2024-Update
Glyma.05G234200 No alias NAC domain containing protein 58 0.03 Orthogroups_2024-Update
Glyma.17G154100 No alias NAC domain containing protein 71 0.02 Orthogroups_2024-Update
Glyma.18G261300 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
Glyma.20G192500 No alias NAC domain containing protein 52 0.03 Orthogroups_2024-Update
MA_15204g0010 No alias (at3g03200 : 250.0) NAC domain containing protein 45... 0.03 Orthogroups_2024-Update
MA_27968g0010 No alias (at1g65910 : 231.0) NAC domain containing protein 28... 0.04 Orthogroups_2024-Update
Potri.002G178700 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Orthogroups_2024-Update
Potri.005G058900 No alias NAC domain containing protein 82 0.03 Orthogroups_2024-Update
Potri.009G161300 No alias NTM1-like 8 0.01 Orthogroups_2024-Update
Potri.010G174600 No alias NAC domain containing protein 28 0.02 Orthogroups_2024-Update
Potri.013G054200 No alias Arabidopsis NAC domain containing protein 87 0.01 Orthogroups_2024-Update
Potri.015G004100 No alias NAC domain containing protein 62 0.02 Orthogroups_2024-Update
Potri.015G046800 No alias NAC domain containing protein 58 0.01 Orthogroups_2024-Update
Potri.019G031600 No alias Arabidopsis NAC domain containing protein 87 0.03 Orthogroups_2024-Update
Solyc06g073050 No alias NAC domain-containing protein 0.03 Orthogroups_2024-Update
Solyc06g074170 No alias NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC) 0.02 Orthogroups_2024-Update
Sopen11g003860 No alias No apical meristem (NAM) protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 20 146
No external refs found!